#!/bin/bash
#;DIAG_NORCPM; FIGFILES:
# figure files name "without suffix"
# should be ps or png file
#;DIAG_NORCPM; HTMLFILENAME: index.html
#;DIAG_NORCPM; TITLE: TITLE here
#;DIAG_NORCPM; COMMENT: COMMENT here
#;DIAG_NORCPM; COLUMN: 1
# parameters
htmlfn="index.html"
comment="NorCPM analysis mean change
"
title="TITLE here"
figs="box_nino34 box_npac box_natl nino34_temp_nug_ts npac_temp_nug_ts natl_temp_nug_ts nino34_saln_nug_ts npac_saln_nug_ts natl_saln_nug_ts sst_bias_12 sst_bias_01 sst_bias_02 sst_bias_03 sst_bias_04 sst_bias_05 sst_bias_06 sst_bias_07 sst_bias_08 sst_bias_09 sst_bias_10 sst_bias_11"
column=(NINO34 NPac NAtl tr 3 3 3 Model\ bias\(TS-SST\)1980-2020 tr DJF tr 3 MAM tr 3 JJA tr 3 SON tr 3
)
## number of figures in a row
## can be a array
ncolarr=${#column[*]}
#export MAGICK_THREAD_LIMIT=1 ## avoid "libgomp: Thread creation failed"
# html header
text=$'\n'
text+=$'\n'
text+=$'\n'
text+=$'\n'
# put comment on top
text+=$'\n'
# convert ps to png and output entry to html
pid=$$
row=1
icol=0
text+=""$'\n'
text+=""$'\n'
# if column start with non integer
while [ ! -z "${column[$icol]}" ] ; do
dst="${column[$icol]}"
if [[ "${dst}" =~ ^[0-9]+$ ]] ; then
break
else
if [ "${dst}" = 'tr' ]; then
dst='
'
fi
if [ "${dst}" = '
' ]; then
text+="${dst}"$'\n'
else
text+="| ${dst} | "$'\n'
fi
icol=$(expr $icol + 1)
fi
done
col=${column[$icol]}
## show figures with table
for i in ${figs}; do
if [ -f "${i}.ps" ] ; then ## ps2png
convert -density 300 "${i}.ps" ${i}.png
if [ $? != 0 ];then
MAGICK_THREAD_LIMIT=1 convert -density 300 "${i}.ps" ${i}.png
fi
gzip -f "${i}.ps"
fi
if [ -f "${i}.png" ] ; then ## trim white edge and make thumbnail
convert ${i}.png -fuzz 1% -trim +repage tmp-${i}-${pid}.png
mv tmp-${i}-${pid}.png ${i}.png
## thumbnail
convert -thumbnail 300 "${i}.png" "${i}_thumb.png"
fi
## fig entry
text+=" | "$'\n'
if [ $row -ge $col ];then
text+=$'
\n'
text+=$'\n'
icol=$(expr $icol + 1)
while [ ! -z "${column[$icol]}" ] ; do
dst="${column[$icol]}"
if [ "${dst}" = 'tr' ]; then
dst='
'
fi
if [[ "${dst}" =~ ^[0-9]+$ ]] ; then
break
elif [ "${dst}" = '
' ]; then
text+="${dst}"$'\n'
icol=$(expr $icol + 1)
else
text+="| ${dst} | "$'\n'
icol=$(expr $icol + 1)
fi
done
if [ $icol -ge $ncolarr ];then
icol=$(expr $ncolarr - 1)
fi
col=${dst}
row=1
else
row=$(expr $row + 1)
fi
done
text+="
"$'\n'
text+="
"$'\n'
# html footer
text+=$'\n'
text+=$' \n'
# output to html file
echo "${text}" > "${htmlfn}"
