#!/bin/bash
#;DIAG_NORCPM; FIGFILES:
# figure files name "without suffix"
# should be ps or png file
#;DIAG_NORCPM; HTMLFILENAME: index.html
#;DIAG_NORCPM; TITLE: TITLE here
#;DIAG_NORCPM; COMMENT: COMMENT here
#;DIAG_NORCPM; COLUMN: 1
# parameters
htmlfn="index.html"
comment="BLOM ensemble SST and HadISST time series
Monthly data, anomaly correlation and Rank histogram.
"
title="TITLE here"
figs="sst_ano_ens_cor box_NINO34 box_NPac box_NAtl NINO34_monts NPac_monts NAtl_monts rhisto_NINO34_t01 rhisto_NINO34_t02 rhisto_NINO34_t03 rhisto_NINO34_t04 rhisto_NINO34_t05 rhisto_NINO34_t06 rhisto_NINO34_t07 rhisto_NINO34_t08 rhisto_NINO34_t09 rhisto_NINO34_t10 rhisto_NINO34_t11 rhisto_NINO34_t12 rhisto_NINO34_t13 rhisto_NINO34_t14 rhisto_NINO34_t15 rhisto_NINO34_t16 rhisto_NINO34_t17 rhisto_NINO34_t18 rhisto_NINO34_t19 rhisto_NINO34_t20 rhisto_NINO34_t21 rhisto_NINO34_t22 rhisto_NINO34_t23 rhisto_NINO34_t24 rhisto_NINO34_t25 rhisto_NINO34_t26 rhisto_NINO34_t27 rhisto_NINO34_t28 rhisto_NINO34_t29 rhisto_NINO34_t30 rhisto_NINO34_t31 rhisto_NINO34_t32 rhisto_NINO34_t33 rhisto_NINO34_t34 rhisto_NINO34_t35 rhisto_NINO34_t36
rhisto_NPac_t01 rhisto_NPac_t02 rhisto_NPac_t03 rhisto_NPac_t04 rhisto_NPac_t05 rhisto_NPac_t06 rhisto_NPac_t07 rhisto_NPac_t08 rhisto_NPac_t09 rhisto_NPac_t10 rhisto_NPac_t11 rhisto_NPac_t12 rhisto_NPac_t13 rhisto_NPac_t14 rhisto_NPac_t15 rhisto_NPac_t16 rhisto_NPac_t17 rhisto_NPac_t18 rhisto_NPac_t19 rhisto_NPac_t20 rhisto_NPac_t21 rhisto_NPac_t22 rhisto_NPac_t23 rhisto_NPac_t24 rhisto_NPac_t25 rhisto_NPac_t26 rhisto_NPac_t27 rhisto_NPac_t28 rhisto_NPac_t29 rhisto_NPac_t30 rhisto_NPac_t31 rhisto_NPac_t32 rhisto_NPac_t33 rhisto_NPac_t34 rhisto_NPac_t35 rhisto_NPac_t36
rhisto_NAtl_t01 rhisto_NAtl_t02 rhisto_NAtl_t03 rhisto_NAtl_t04 rhisto_NAtl_t05 rhisto_NAtl_t06 rhisto_NAtl_t07 rhisto_NAtl_t08 rhisto_NAtl_t09 rhisto_NAtl_t10 rhisto_NAtl_t11 rhisto_NAtl_t12 rhisto_NAtl_t13 rhisto_NAtl_t14 rhisto_NAtl_t15 rhisto_NAtl_t16 rhisto_NAtl_t17 rhisto_NAtl_t18 rhisto_NAtl_t19 rhisto_NAtl_t20 rhisto_NAtl_t21 rhisto_NAtl_t22 rhisto_NAtl_t23 rhisto_NAtl_t24 rhisto_NAtl_t25 rhisto_NAtl_t26 rhisto_NAtl_t27 rhisto_NAtl_t28 rhisto_NAtl_t29 rhisto_NAtl_t30 rhisto_NAtl_t31 rhisto_NAtl_t32 rhisto_NAtl_t33 rhisto_NAtl_t34 rhisto_NAtl_t35 rhisto_NAtl_t36"
column=(1 NINO34 NPac NAtl tr 3 3 RankedHisto_by_time tr NINO34 tr 12 12 12 NPac tr 12 12 12 NAtl tr 12 12 12
)
## number of figures in a row
## can be a array
ncolarr=${#column[*]}
#export MAGICK_THREAD_LIMIT=1 ## avoid "libgomp: Thread creation failed"
# html header
text=$'\n'
text+=$'\n'
text+=$'\n'
text+=$'\n'
# put comment on top
text+=$'\n'
# convert ps to png and output entry to html
pid=$$
row=1
icol=0
text+=""$'\n'
text+=""$'\n'
# if column start with non integer
while [ ! -z "${column[$icol]}" ] ; do
dst="${column[$icol]}"
if [[ "${dst}" =~ ^[0-9]+$ ]] ; then
break
else
if [ "${dst}" = 'tr' ]; then
dst='
'
fi
if [ "${dst}" = '
' ]; then
text+="${dst}"$'\n'
else
text+="| ${dst} | "$'\n'
fi
icol=$(expr $icol + 1)
fi
done
col=${column[$icol]}
## show figures with table
for i in ${figs}; do
if [ -f "${i}.ps" ] ; then ## ps2png
convert -density 300 "${i}.ps" ${i}.png
if [ $? != 0 ];then
MAGICK_THREAD_LIMIT=1 convert -density 300 "${i}.ps" ${i}.png
fi
gzip -f "${i}.ps"
fi
if [ -f "${i}.png" ] ; then ## trim white edge and make thumbnail
convert ${i}.png -fuzz 1% -trim +repage tmp-${i}-${pid}.png
mv tmp-${i}-${pid}.png ${i}.png
## thumbnail
convert -thumbnail 300 "${i}.png" "${i}_thumb.png"
fi
## fig entry
text+=" | "$'\n'
if [ $row -ge $col ];then
text+=$'
\n'
text+=$'\n'
icol=$(expr $icol + 1)
while [ ! -z "${column[$icol]}" ] ; do
dst="${column[$icol]}"
if [ "${dst}" = 'tr' ]; then
dst='
'
fi
if [[ "${dst}" =~ ^[0-9]+$ ]] ; then
break
elif [ "${dst}" = '
' ]; then
text+="${dst}"$'\n'
icol=$(expr $icol + 1)
else
text+="| ${dst} | "$'\n'
icol=$(expr $icol + 1)
fi
done
if [ $icol -ge $ncolarr ];then
icol=$(expr $ncolarr - 1)
fi
col=${dst}
row=1
else
row=$(expr $row + 1)
fi
done
text+="
"$'\n'
text+="
"$'\n'
# html footer
text+=$'\n'
text+=$' \n'
# output to html file
echo "${text}" > "${htmlfn}"
