#!/bin/sh 

FCMIP5=surfdata_1.9x2.5_simyr1850_c110114.nc
FCMIP6=surfdata_1.9x2.5_16pfts_Irrig_CMIP6_simyr1850_c170824.nc
FOUT=`basename $FCMIP5 .nc`_CMIP6.nc

# create output file 
cd /cluster/shared/noresm/inputdata/lnd/clm2
ncks -O surfdata/$FCMIP5 surfdata/$FOUT 
chmod +xwr surfdata/$FOUT

# add old PCT_PFT 
#ncks -A -v PCT_CFT,PCT_CLAY,PCT_CROP,PCT_GLACIER,PCT_GLC_GIC,PCT_GLC_ICESHEET,PCT_GLC_MEC,PCT_GLC_MEC_GIC,PCT_GLC_MEC_ICESHEET,PCT_LAKE,PCT_NATVEG,PCT_NAT_PFT,PCT_SAND,PCT_URBAN,PCT_WETLAND surfdata_map/$FCMIP6 surfdata/$FOUT
ncks -A -v PCT_CFT,PCT_CLAY,PCT_CROP,PCT_GLACIER,PCT_GLC_GIC,PCT_GLC_ICESHEET,PCT_GLC_MEC,PCT_GLC_MEC_GIC,PCT_GLC_MEC_ICESHEET,PCT_LAKE,PCT_NATVEG,PCT_NAT_PFT,PCT_SAND,PCT_WETLAND surfdata_map/$FCMIP6 surfdata/$FOUT